Deficiency of the mitochondrial enzyme 2-methyl-3-hydroxybutyryl-CoA dehydrogenase involved in isoleucine metabolism causes an organic aciduria with atypical neurodegenerative course. The disease-causing gene is
Organic acidurias are inherited metabolic disorders caused by the deficiency of enzymes involved in the mitochondrial oxidation of coenzyme A (CoA)-activated acyl compounds derived from amino acid breakdown. Clinical symptoms frequently develop at times of increased protein catabolism due to fasting or illness, leading to increased flux through oxidative pathways and accumulation of pathological metabolites. We have previously reported a novel organic aciduria caused by a deficiency of the mitochondrial enzyme 2-methyl-3-hydroxybutyryl-CoA dehydrogenase (MHBD) involved in isoleucine metabolism (Zschocke et al,
Here we report that the severity of symptoms in patients with MHBD deficiency (MHBDD) is not correlated with residual enzyme activity of the mutated HSD10 proteins, suggesting that the HSD10 protein has other functions in addition to the enzymatic activity. In vertebrate systems, no loss-of-function data are available for HSD10, so far. We present evidence in
Our data indicate that loss of (non-enzymatic) HSD10 function mediated by gene mutation, knock-down or knock-out causes mitochondrial dysfunction and apoptotic cell death. These findings shed new light on the pathogenesis of the clinical features of MHBDD and argue for new approaches to therapy. They also may be of relevance to the understanding of neurodegeneration in other conditions.
In order to gain insight into the pathogenesis of neurodegeneration in MHBD deficiency and to obtain further information on the biological role of HSD10, we investigated additional patients with MHBDD. The condition was retrospectively diagnosed in one child (case 1, Supporting Information) with a very severe neonatal presentation, absent neurological development and death from progressive hypertrophic cardiomyopathy at the age of 7 months. MHBD activity in fibroblasts, as determined in two independent laboratories, was only partially reduced to approximately 30% of normal. This was considerably higher than for other patients with MHBDD. Sequence analysis of the complete coding region of the
Observations in these patients indicated that the development and severity of symptoms in MHBDD is unrelated to residual enzyme activity. In order to confirm these findings we carried out
Crystal structure of HSD10. (
Since HSD10 WT and mutations are localized to mitochondria and patients with MHBDD show signs of mitochondrial dysfunction, we analysed mitochondrial morphology by EM in fibroblasts derived from patients compared with control fibroblasts (
Since knock-out of
To generate the second conditional knock-out line, mice carrying a floxed allele of
In the central nervous system (CNS) the locus coeruleus contains noradrenergic neurons and we set out to analyse the morphology of the mitochondria in this region by EM in conditional knock-out mice. In the loci coerulei of DBH-Cre HSD10 deficient mice, almost 30% of the mitochondria showed depletion of cristae and appeared ‘empty’, more than 50% of the mitochondria were loosely packed and had swollen cristae, while normal morphology (dense, dark) was only found in 20% (
Pictures of 33 random systematically chosen visual fields were taken in a magnification of 11.5 × 103, scale bars: 100 nm.
In order to study HSD10 loss of function in early vertebrate embryos we turned to
Next we tested whether HSD10 knock-down impaired mitochondrial function. Antisense MoATG was microinjected into the prospective ectoderm and the injected region (animal cap) was explanted and cultured. Explanted animal caps differentiate into a homogeneous tissue, the so-called atypical epidermis. After 2 days in culture, when control embryos had reached tailbud stage, pyruvate turnover was measured as a parameter of mitochondrial function. MoATG-injected samples displayed a 40% reduction in pyruvate turnover compared to the uninjected or control Mo (MoCo) injected tissue. Impaired mitochondrial function was specific because co-injection of a human HSD10 expression construct which could not be blocked by the HSD10 MoATG rescued pyruvate turnover almost to the level of uninjected controls (
EM analysis revealed that the morphology of mitochondria in animal cap explants was changed after HSD10 knock-down (
Next we asked whether Mo-mediated HSD10 knock-down would interfere with the establishment of the early body plan in
HSD10 MoATG-induced apoptosis could be rescued by human HSD10 WT which also rescued the defects in neural tissue (
Experimental scheme. Quantification of TUNEL staining on the right (injected) side of tailbud stage embryos (NF St. 33/34) normalized against the left (control) side. The standard error of four individual experiments ( Dendritic cells from WT mice and mice with a conditional knock-out in endothelial cells and haematopoietic stem cells (Tie2) were transfected with plasmids (pT-Rex-DEST30) bearing human HSD10 WT or mutations for 48 h before TUNEL assay was performed. The percentage of TUNEL positive cells of three independent experiments and standard error are shown. Statistical significance (*) of difference from WT cells was determined at
These experiments demonstrate that loss of HSD10 results in induction of apoptosis independent of the cell type and organism. The rescue experiments furthermore show that apoptosis after HSD10 loss of function is not dependent on the enzymatic activity of HSD10, again arguing for a non-enzymatic function of this protein which is required in mitochondria.
Mitochondrial dysfunction is a commonly observed feature of primary disorders of mitochondrial intermediary metabolism such as the classical organic acidurias. Neurological abnormalities in these conditions are usually attributed to accumulation of toxic substrates proximal to a specific enzymatic block, causing secondary interference with energy metabolism. Primary apoptotic nerve cell death is not a feature of organic acidurias. Here we report that neurodegeneration in MHBDD, a recently identified organic aciduria, is not due to loss of enzyme activity and, presumably, the accumulation of toxic metabolites, but rather involves a fundamentally different pathomechanism. Although the respective enzyme, HSD10 has an important role in mitochondrial metabolism, we show that the adverse effects of its deficiency are primarily caused by a non-enzymatic effect triggering mitochondrial disintegration, apoptosis and cell death.
Several lines of evidence presented here support this view. Measurements of enzymatic activity in patient fibroblasts revealed that the R130C and D86G mutations associated with classical and neonatal neurodegenerative forms of MHBDD, had up to 30% residual activity compared to the WT protein. In contrast, the Q165H mutation that was identified in three children with normal neurological development was associated with less than 3% residual enzymatic activity. Thus the severity of the clinical phenotype is not at all correlated with the enzymatic activity of the mutated HSD10 proteins. We subsequently set out to corroborate this observation with experimental evidence. Mitochondrial integrity and cell viability could be restored after HSD10 knock-down in
Additional clinical observations support our conclusions. Attempts to improve the condition of MHBDD patients by a restrictive diet that avoids accumulation of potentially toxic precursor metabolites failed (unpublished data). Slow progressive neurodegeneration without metabolic crises is atypical for organic acidurias caused by defects in mitochondrial intermediary metabolism, and deficiency of the enzyme 2-methylacetoacetyl-CoA thiolase, positioned immediately after MHBD in the isoleucine pathway, causes accumulation of the same metabolites in sometimes even higher concentrations but is associated with a completely different disease picture (episodic ketoacidosis, no neurodegeneration). In contrast to most other metabolic disorders, no null mutations that completely eliminate the protein have been identified in MHBDD. Indeed, one particular mutation, R130C, is found in more than half of cases and has usually occurred
Reduction or loss of HSD10 in
Cellular energy failure caused by mitochondrial dysfunction is thought to play an important role in the development of AD, and several studies indicated that this effect is caused by a direct interaction of Aβ with HSD10 (Lustbader et al,
Our conclusion that toxic metabolites are not responsible for the clinical symptoms observed in MHBDD patients implies that treatment targeting reduction of precursor metabolites through dietary measures is not indicated. This is in line with the clinical observation that dietary reduction of the isoleucine load has no beneficial effect on the course of this disease. In contrast, treatment of patients with MHBDD should aim at reducing mitochondrial stress and maintaining mitochondrial homeostasis through proactive management of infections and fever and possibly the administration of vitamins and cofactors. Our results may also contribute to a better understanding of neurodegeneration in the context of AD. Strategies to reduce Aβ toxicity through inhibition of its interaction with HSD10 could make HSD10 an interesting protein for Alzheimer's therapy.
Bl-21 DE3 cells (Invitrogen) were used for protein expression after transformation with p11 expression vectors containing cDNA of HSD10 WT or mutations. Bacteria were cultivated at 37 °C and 160 rpm until OD600 ≥ 1. Protein expression was induced with 0.5 mM IPTG (Sigma) and continued overnight at 30 °C. Cells were harvested for 15 min at 6500 rpm (4 °C) and resuspended in binding buffer (500 mM NaCl, 5% glycerol, 50 mM HEPES pH 7.5, 5 mM imidazole, 1 mM PMSF, 0.5 mM TCEP, protease inhibitor cocktail tablet, EDTA free). Lysis of cells was achieved with an EmulsiFlex-C5 High Pressure Homogenizer (Avestin). Cell debris was removed by centrifugation (45 min, 16 500 rpm, 4 °C) and the supernatant was subjected to immobilized metal ion affinity chromatography. His-tagged proteins were eluted from Ni2+-sepharose (GE Healthcare) with elution buffer containing 250 mM imidazole. TEV protease (Invitrogen) was used to remove His tags. HSD10 enzymes were further purified by gelfiltration using HiLoad™ 16/60 Superdex 75 prep grade (GE Healthcare) and by ion exchange chromatography using ‘Resource S’ and ‘Mono Q5/50GL’ (GE Healthcare). Enzyme purification was evaluated by SDS-PAGE. Protein mass was determined by mass spectroscopy in an Agilent LC/MSD TOF.
Crystallization of HSD10 WT protein was performed by mixing 14.25 mg/ml protein and crystallization solution (25.5% PEG3350, 0.17 M (NH4)2SO4, 15% glycerol) in a 1:1 ratio at 4 °C in sitting drops. Experiments were performed in the presence of 5 mM NADH (Sigma). Crystals were mounted directly from the crystallization solution and flash-cooled in liquid nitrogen. Data were collected on the synchrotron beamline SLS-X10 (SLS, Switzerland). The 3D structure of HSD10 was determined to a resolution of 1.2 Å by molecular replacement with the medium resolution structure of HSD10 as search model (PDB id 1u7t). The structure was deposited with the ProteinDataBank under the accession number 2023. Data collection and refinement statistics are found in Supporting Information
Different amounts of purified enzyme and substrate in the presence of the cofactor NAD+ (Sigma) (400 µM in 100 mM Tris/HCl pH 9, 25 °C) were incubated in a SpectraMax M5/M5e Microplate Reader and the change in nucleotide cofactor absorbance (
Purified proteins (10 µM) in HEPES buffer (10 mM, pH 7.5) were incubated with 150 mM NaCl, 85 µM substrate and 0.5 µl SYPRO Orange (Invitrogen) in the presence or absence of cofactors NAD+ and NADH (200 µM). Fluorescent emission was measured in an Mx3005p RT-PCR machine (Stratagene) and incubation temperature increased from 25 to 75 °C (1 °C/min).
Primary fixation was done with 2.5% glutaraldehyde in PBS. For easier handling tissue culture cells were scraped off and embedded in 2% agarose. All samples were postfixed with 1% osmium tetroxide (Serva Electrophoresis) in 100 mM phosphate buffer pH 7.2 for 1 h on ice, washed extensively with water, block-stained with 1% aqueous uranyl acetate (Serva Electrophoresis) for 1 h at 4 °C, dehydrated in a graded series of ethanol at ambient temperature, infiltrated with mixtures of ethanol/Epon and finally embedded in Epon. Ultrathin sections were stained with uranyl acetate and lead citrate (Serva Electrophoresis) (Venable & Coggeshall,
All samples were sectioned at random angles resulting in cross and longitudinal sections of mitochondria. For the morphological analyses the plain of sections was not relevant.
For each mitochondrium the density was used as an ordinal variable (dense, medium or depleted). The variable was evaluated as a categorical variable within a logistic model framework. The hypothesis of equal density distribution rates for different treatments was tested controlling for a suitable covariante (animal cap, brain sections or patient) in the respective experiment. All analyses have been performed with SAS 9.1 on PC (SAS Institute, Inc., Cary, NC). Differences were counted as significant if the
As mice deficient for HSD10 display embryonic lethality, two conditional knock-out mouse lines were generated. The construct used to generate floxed HSD10 alleles contained the coding sequence for HSD10 with exon 1 being flanked by loxP sites. This construct was introduced into embryonic stem cells (E14.1 of the 129P2/Ola Hsd stem) via electroporation. 20 µg DNA were mixed with 107 cells in PBS and electroporated at 240 V and 960 µF. Stable clones were selected with G418 and cultured in DMEM containing LIF (myeloid leukemia inhibitory factor) on a layer of Feeder cells. Blastocysts were gained from pregnant C57Bl/6N mice at day 3.5 p.c. Stable transfected ES cells (20–25) were injected into the blastocoel and the blastocysts were transferred into pseudo-pregnant NMRI females at day 2.5 p.c. Resulting chimeric male animals were backcrossed with C57Bl/6 N females to homozygosity.
To generate an
The second conditional knock-out (
Animals were killed and immediately dissected to collect brains. Tissues were fixed in 4% formaldehyde, 1% glutaraldehyde in PBS and cut in Vibratome sections (50 µm). Appropriate regions of the brain were identified by pigmentation and dissected from these Vibratome sections prior to electron microscopy.
Dendritic cells from WT and HSD10 knock-out mice were isolated from bone marrow and expanded for 10 days in GM-CSF supplemented F1/16 medium. The ratio of CD11 positive cells used for the experiments was measured by FACS analysis and varied between 70 and 90%.
Dendritic cells were transfected with 0.5 µg/106 cells plasmid-DNA (pT-Rex-DEST30) coding for HSD10 WT or mutations, respectively by electroporation (Microporator MP-100, Peqlab) using single pulses of 990 V for 40 ms. Transfection efficiency was confirmed by PCR for the neomycin-gene on pT-Rex-DEST30.
HSD10 is an essential enzyme in the isoleucine breakdown pathway and has also been reported as an important mediator of mitochondrial toxicity in Alzheimer's disease. A deficiency of HSD10 caused by mutations in the
By investigating additional patients with a genetic deficiency of HSD10 we show that there is no correlation between enzyme activity and clinical presentation. Loss-of-function and rescue experiments in
The exact molecular mechanisms leading to mitochondrial disintegration and neuronal apoptosis in HSD10 deficiency are still unknown but our data show that the clinical effects cannot be attributed to the accumulation of toxic metabolites in the isoleucine pathway or other metabolic effects. Rather, HSD10 has a protective effect on mitochondrial integrity. Delineation of this protective mechanism should provide new therapeutic perspectives for HSD10 dysfunction. Children with a genetic deficiency of HSD10 are unlikely to benefit from an isoleucine-restricted diet, previously suggested as a therapeutic option. Treatment should aim at reducing mitochondrial stress and maintaining mitochondrial homeostasis through proactive management of infections and fever and possibly the administration of vitamins and cofactors.
TUNEL assay was performed 48 h after transfection using the
Eggs were obtained by injecting human chorionic gonadotropin (Sigma) into female
For the specific knock-down of HSD10 in
The following DNA constructs were used in rescue experiments: pT-Rex-DEST30 containing cDNA of hHSD10 and the mutations R130C, D86G and Q165H. Constructs were obtained by cloning using Gateway Technology (Invitrogen). Other constructs were pCS2+_myc containing xHSD10 and xHSD10 including the 5′UTR.
Embryos were cultured in 1× MBSH (88 mM NaCl, 1 mM KCl, 2.4 mM NaHCO3, 0.82 mM MgSO4 × 7H2O, 0.41 mM CaCl2 × 2H2O, 0.33 mM Ca(NO3) × 4H2O, 10 mM HEPES, pH 7.5) for microinjection and injected with 5 nl of diluted Mo or DNA into each blastomere.
Embryos of different stages were fixed in MEMFA (100 mM MOPS, 2 mM EGTA, 1 mM MgSO4, 3.7% formaldehyde), and stored in methanol at −20 °C. Whole-mount
Embryos were fixed in MEMFA for terminal deoxynucleotidyl TUNEL analysis and stored in methanol at −20°C. The whole-mount staining protocol was previously described (Hensey & Gautier,
Fibroblasts from MHBDD patients and control fibroblasts were cultivated in DMEM ReadyMix (Paa Laboratories) at 37°C and 5% CO2. Mitochondrial staining in patient fibroblasts was achieved within 20 min with 300 nM Mitotracker Green FM (Invitrogen) on cells fixed with 3.7% formaldehyde on coverslips. Mitochondria were visualized after mounting in Mowiol (Merck) on a Perkin Elmer spinning disc confocal ERS-FRET on Nikon TE2000 inverted microscope.
The study was approved by the Ethical Committee of the Medical Faculty of Heidelberg University.
Dr. Willy Lehnert, University Children's Hospital Freiburg, Germany, carried out the initial metabolic characterization in the patient of case 1. The clinical characterization of patients with MHBD deficiency was kindly supported by the Reimann-Dubbers Foundation, Heidelberg. The Structural Genomics Consortium is a registered charity (number 1097737) that receives funds from the Canadian Institutes for Health Research, the Canadian Foundation for Innovation, Genome Canada through the Ontario Genomics Institute, GlaxoSmithKline, Karolinska Institutet, the Knut and Alice Wallenberg Foundation, the Ontario Innovation Trust, the Ontario Ministry for Research and Innovation, Merck & Co., Inc., the Novartis Research Foundation, the Swedish Agency for Innovation Systems, the Swedish Foundation for Strategic Research and the Wellcome Trust. The project was supported by the Oxford NIHR Musculoskeletal Biomedical Research Unit. We thank Afsaneh Majdazari for her help with the preparation of murine ganglia.
Supporting information is available at EMBO Molecular Medicine online.
The authors declare that they have no conflict of interest.
All authors were involved in ongoing discussions about the study, read and/or corrected drafts of the manuscript and agreed with the final manuscript.
Katharina Rauschenberger carried out the extensive experimental work in
Katja Schöler, Kathryn L. Kavanagh, Naeem Shafqat and Udo Oppermann carried out and/or supervised functional analyses of overexpressed human mutations and HSD10 crystallization.
Jörn Oliver Sass and Ronald J. A. Wanders carried out metabolite and enzyme analyses for diagnosis or confirmation of diagnosis in patients with HSD10 deficiency.
Sven Sauer, Jürgen G. Okun and Stefan Kölker analysed mitochondrial function in homogenized
Zdenka Djuric, David Stern, Peter Nawroth and Angelika Bierhaus carried out or supervised siRNA studies in murine cells and/or were involved in the generation of
Cordula Rumig, Günter Hämmerling and Bernd Arnold generated and bred the
Nicole I. Wolf, Julian H. P. Shield and Udo Wendel diagnosed and/or clinically characterized the patients with HSD10 deficiency.
Heinz Schwarz supervised and carried out electron microscopy.
Christine Fischer carried out statistical analyses.
Beate Grziwa, Heiko Runz and Astrid Nümann carried out or assisted in different experiments.
Georg F. Hoffmann and Claus R. Bartram contributed to the design of the study and the interpretation of the data.
Herbert Steinbeisser co-initiated and supervised the experimental work in
Johannes Zschocke initiated and coordinated the study, was involved in all clinical and experimental aspects of the study, co-wrote the manuscript and serves as guarantor.
OMIM, Online Mendelian Inheritance in Man:
HSD17B10
NCBI, Entrez Gene:
HSD17B10
Ensembl genome browser:
HSD17B10:
Detailed facts of importance to specialist readers are published as ”Supporting Information”. Such documents are peer-reviewed, but not copy-edited or typeset. They are made available as submitted by the authors.