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Cell differentiation has long been theorized to represent a switch in a bistable system, and recent experimental work in micro-organisms has revealed bistable dynamics in small gene regulatory circuits. However, the dynamics of mammalian cell differentiation has not been analyzed with respect to bistability.
Here we studied how HL60 promyelocytic precursor cells transition to the neutrophil cell lineage after stimulation with the differentiation inducer, dimethyl sulfoxide (DMSO). Single cell analysis of the expression kinetics of the differentiation marker CD11b (Mac-1) revealed all-or-none switch-like behavior, in contrast to the seemingly graduated change of expression when measured as a population average. Progression from the precursor to the differentiated state was detected as a discrete transition between low (CD11bLow) and high (CD11bHigh) expressor subpopulations distinguishable in a bimodal distribution. Hysteresis in the dependence of CD11b expression on DMSO dose suggests that this bimodality may reflect a bistable dynamic. But when an "unswitched" (CD11bLow) subpopulation of cells in the bistable/bimodal regime was isolated and cultured, these cells were found to differ from undifferentiated precursor cells in that they were "primed" to differentiate.
These findings indicate that differentiation of human HL60 cells into neutrophils does not result from a simple state transition of a bistable switch as traditionally modeled. Instead, mammalian differentiation appears to be a multi-step process in a high-dimensional system, a result which is consistent with the high connectivity of the cells' complex underlying gene regulatory network.
During cell differentiation, an immature unspecialized cell assumes a new, stable and lasting phenotype [
Attempts to understand this all-or-none switching between phenotypes led to the reemergence of the concept of bistability. First proposed by Delbrück in 1948 [
It is commonly postulated that bistability governs cellular differentiation in mammalian cells [
The human promyelocytic HL60 cells robustly differentiate into neutrophils within 6 days in the presence of 1.25% (v/v) DMSO [
To determine whether CD11b expression in HL60 cells stimulated to differentiate into neutrophils by DMSO undergo discontinuous switching with a bimodal population distribution at intermediate stages that is characteristic of bistability, we monitored the time- and concentration-dependence of CD11b expression. As expected, when the whole population was analyzed using Western blots, CD11b expression appeared to increase gradually with increasing duration of DMSO treatment as the stimulated cells differentiated into neutrophils (Fig.
Mean and inter-quartile ratio (IQR) of fluorescence intensities for Fig. 3.
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Day 1 | Day 3 | Day 5 | Day 7 | ||
| Mean | 123.2 | 229.9 | 276.2 | 541.3 | ||
| IQR | 5.00 | 9.67 | 11.32 | 3.86 | ||
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0% DMSO | 0.3% DMSO | 0.5% DMSO | 0.7% DMSO | 0.9% DMSO | 1.1% DMSO |
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| Mean | 197.1 | 138.4 | 170.7 | 282.9 | 291.1 | 395.7 |
| IQR | 1.37 | 1.25 | 1.41 | 3.12 | 4.24 | 3.59 |
The inter-quartile ratio was calculated as the ratio of the 75th and 25th percentiles in signal intensity for each time point in Fig. 3B and each DMSO concentration in Fig. 3D, representing the spread of the histogram.
Moreover, when we carried out similar studies in which we stimulated HL60 precursor cells with different concentrations of DMSO (0% to 1.1%) and analyzed CD11b expression at the stationary state (7d), we also observed bimodality (Fig.
The "blurring" of the two peaks that we observed in the bimodality (Fig.
To confirm that the observed bimodal response in CD11b expression was due to switch-like dynamics, rather than an ultrasensitive transition (i.e., steep step in the dose-response curve that acts a threshold [
Cells were first stimulated with increasing concentrations of DMSO for 7 days, reaching steady-state ("forward reaction"), and the proportion of cells that became CD11bHigh was recorded. For the "backward reaction", maximally differentiated cells (treated with 1.25% DMSO for 7 days) were resuspended with various concentrations of DMSO for another 7 days to arrive at new stationary states, and the fraction of CD11bHigh cells was similarly noted. Care was taken to ensure that the cells were never exposed to normal medium (except for the 0% DMSO backward reaction data point), because it cannot be excluded that such a short pulse of DMSO-free treatment may create unexpected and lasting effects interfering with hysteresis.
We observed a lag in cellular response in the backward versus forward reactions, as delineated by the two non-overlapping arms in the dose-response curves (Fig.
The demonstration of bimodality and hysteresis in CD11b expression of differentiating HL60 cells is consistent with an underlying gene regulatory network of the structure shown in Fig.
Bistability has been proposed as a generic principle that governs differentiation in higher metazoans. However, since mammalian cell differentiation is controlled by regulatory interactions between hundreds, perhaps thousands of genes, and not by isolated one- or two-gene modules as widely assumed in bistability models [
Due to the abundance of mutual feedback regulation loops in the mammalian gene regulation network [
Seven days of DMSO treatment at 0.8% put the cell population in the bistable regime, in which typically more than half of the cells are in the CD11bHigh state. The CD11bLow cells were isolated using FACS, immediately recultured, and restimulated with 0.8% DMSO for another 7 days. During this period, flow cytometry analysis was performed daily to monitor the fraction of CD11bHigh expressing cells (Fig.
Three possible outcomes could be expected. First, the sorted CD11bLow subpopulation could display a
We observed the last of the three possibilities: upon restimulation with intermediate-dose DMSO, the cells from the CD11bLow subpopulation were not only capable of expressing CD11b, but did so at an accelerated rate compared to the native control population (Fig.
Interestingly, even after restimulating these cells (i.e., two rounds of DMSO in total), a CD11bLow subpopulation was still observable. We thus asked the same question for the priming process as we originally did for the differentiation process: does the heterogeneity in the priming process result from the existence of other metastable "pre-primed" states or do the unprimed cells represent a resistant sub-population? To address this question, the CD11bLow subpopulation that appeared after one round of re-stimulation with DMSO was FACS sorted and restimulated for a second time with 0.8% DMSO for another seven days (three rounds of DMSO treatment in total) (Fig.
Taken together, these results indicate that human HL60 cell differentiation is a multi-step process, consisting of at least two steps: (1) an initial transition step from the native CD11bLow state to the "primed" CD11bLow state and (2) a second step from the "primed" state to the CD11bHigh state. The observation that a second round of sorting and restimulation did not alter the rate of CD11bHigh cell production indicates that the process of "priming" (step 1) went through to completion (e.g. all "primed" cells are in the same state) at the perturbation strength conferred by 0.8% DMSO for 7 days. In contrast, the second step leading to the high expression of CD11b appeared to be a switch that only partially ran to completion in 0.8% DMSO, hence exposing not only the existence of a "primed" undifferentiated state, but also the stochastic nature of its transition to the differentiated CD11bHigh state [
Our results may also explain why cellular differentiation processes often take as long as several days to weeks to complete, although molecularly, they essentially consist of a change in gene expression profile which could be completed in a day at the level of individual genes. Specifically, the results also explain why, despite hysteresis, prolonged exposure (> 3 days) to the stimulating agents DMSO and all-trans-retinoic acid is necessary to achieve maximal neutrophil differentiation in HL60 cells ([
At the moment, the molecular mechanisms that establish the primed state are not known. It is likely that in order to switch the transcriptome to that of the differentiated state, multiple waves of transcriptional activation must occur in which newly synthesized transcription factors regulate other (transcription) factors. Thus, the primed state may reflect a state in which such intermediate regulatory proteins have become available. Moreover, remodeling of chromatin to make loci of differentiation-specific genes accessible for transcription may contribute to the multi-step characteristics of differentiation with kinetically identifiable intermediate states [
In this study, we examined the dynamics of mammalian cell differentiation by studying the expression kinetics of the differentiation marker CD11b during neutrophil differentiation in DMSO-treated HL60 cells. Although the behavior of this marker is in agreement with simple bistability models [
HL60 cells (ATCC) were cultured in IMDM medium (ATCC) supplemented with 10% fetal bovine serum and 1% glutamine plus penicillin and streptomycin. Cells of passage 7 (after receipt from ATCC) at a density of 1.0 × 106 cells/ml and growing at a basal rate of 1.3–1.7 day -1 were treated with variable concentrations of DMSO (Sigma) ranging from 0.3% to 1.25% (v/v) to induce differentiation. At each time point, cells were harvested from the suspension culture, pelleted, and processed for either Western blot and/or flow cytometry analysis (see below). Differentiation was monitored primarily with CD11b expression by flow cytometry, but morphology by Giemsa stain and nitroblue tetrazolium-reducing activities were also utilized. A stationary state was reached at day 6 since the fraction of differentiated cells and the level of expression of CD11b did not further increase when cells were monitored up to day 12 after induction of differentiation.
1 × 106 cells were pelleted and directly lysed with 20% sample-loading buffer for SDS-polyacrylamide gel electrophoresis (SDS-PAGE) and immediately boiled for 5 min at 95°C. 30–50 μl of total cell lysate were fractionated on SDS-PAGE gel and transferred to nitrocellulose membranes. Following blocking with 5% milk/PBST (phosphate buffered saline with Tween 20), the membrane was probed with a 1:500 dilution of CD11b/Mac-1 antibody (BD Pharmingen). Antibody binding was detected with a 1:5000 dilution of peroxidase labeled anti-mouse IgG (Vector) and luminescence was detected with Supersignal West Dura Signal reagents (Pierce).
For the Guava- PCA system (see below) 200,000 cells were pelleted and incubated in 7 μl of CD11b/MAC-I R-PE conjugated fluorescence antibody (BD Pharmingen) on ice for 30 min, washed with ice-cold 1% fetal calf serum/PBS/0.01% NaN3 (NaN3 is left out in sorting experiments), and resuspended in the same buffer at 106 cells/ml density for analysis. Intracellular phosphorylated-Erk levels were detected using the BD PhosFlow kit (BD Pharmingen) and the protocol provided. Briefly, 200,000 cells were fixed with BD PhosFlow Fix Buffer (BD Pharmingen) at 37°C for 10 min, pelleted, washed with BD PhosFlow Perm/Wash Buffer (BD Pharmingen) twice, incubated with 5 μl of a 1:5 dilution of Anti-Phospho-ERK1/2:PE conjugated fluorescence antibody (BD Pharmingen) in the dark at room temperature for 1 hour, washed again with Perm/Wash Buffer, and resuspended in the same buffer at 106 cells/ml density for analysis. For fluorescence-activated cell sorting, staining was scaled up 10-fold to 50 μl of CD11b/MAC-I R-PE conjugated fluorescence antibody (BD Pharmingen) per 106 cells and cells were resuspended at 8–10 × 106 cells/ml. Pilot antibody titration experiments were performed to ensure that staining occurred at least at 2-fold saturation. Ice-cold 1% fetal calf serum/PBS/0.01% NaN3 was used to establish background signal with unstained cells.
Flow cytometry was performed on a Guava-PCA microfluidic-based flow cytometer (GuavaTechnologies, Inc). Fluorescence activated cell sorting was performed with either a Becton Dickinson FACSVantage (Becton Dickinson) or a Becton Dickinson FACSAria (Becton Dickinson) flow cytometer. Data analysis was done with either CytoSoft™ 2.1.1. (GuavaTechnologies, Inc) or WinMDI software. For cell sorting, starting cell number ranged between 40–80 × 106 cells, and cells were sorted into ice-cold medium for a maximum of 3 hours. Gates for sorting the CD11bLow subpopulation in the 0.8% DMSO-treated samples were set relative to an untreated, native population. The latter was also mock sorted and processed in exactly the same way as the former to control for the effects of FACS sorting on cellular expression of CD11b. To remove the staining antibody before reculturing, pelleted cells were suspended in pH.2.25 MES (morpholinoethanesulfonic acid)/Tris buffer for 30 s. A 10-fold volume of pH 7.4 PBS was immediately added for neutralization and the cells were pelleted and resuspended in culture medium. After antibody removal the cells had fluorescence signal intensities on par with unstained HL60 cells and exhibited normal viability for future immunofluorescence staining.
H.H.C. participated in the design of the study, performed the experiments, and drafted the manuscript. P.Y.O. established the antibody-removal protocol. D.E.I. supervised the work and revised the manuscript. S.H. conceived of the study, participated in the experiments, and drafted the manuscript. All authors read and approved the final manuscript.
This work was funded by grants to S.H. from the Air Force Office of Scientific Research (F49550-05-1-0078) and the Patterson Trust, and to D.E.I. from the National Institutes of Health (CA55833) and the Army Research Office (W911NF-04-1-0273). H.H.C. is supported by the Presidential Scholarship and the Ashford Fellowship of Harvard University. H.H.C. would like to thank K. Farh for critical reading of the manuscript.